STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM77762.1PFAM: Gram-negative bacterial tonB protein. (148 aa)    
Predicted Functional Partners:
EGM78986.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
 0.729
EGM78887.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
 0.729
tolR
TolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.729
EGM78987.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
  0.651
EGM78888.1
Biopolymer transport protein; Overlaps CDS with the same product name; PFAM: MotA/TolQ/ExbB proton channel family.
  
  0.651
EGM78889.1
Biopolymer transport protein; Overlaps CDS with the same product name; PFAM: MotA/TolQ/ExbB proton channel family.
  
  0.651
tolQ
TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  0.651
EGM77364.1
Hypothetical protein.
    
   0.592
EGM78677.1
Cobalamin-dependent methionine synthase I; PFAM: Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.588
EGM77052.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.
  
 0.554
Your Current Organism:
Rheinheimera sp. A13L
NCBI taxonomy Id: 506534
Other names: R. sp. A13L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.