STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM76634.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
EGM76636.1
Overlaps CDS with the same product name; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.980
EGM76635.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Overlaps CDS with the same product name; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
   
 0.950
EGM76637.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Overlaps CDS with the same product name; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.922
EGM76638.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
   
 0.918
EGM76639.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
   
 0.915
EGM76644.1
MSHA-type pilus biogenesis protein MshL; PFAM: Secretin N-terminal domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL.
 
     0.864
EGM76646.1
Hypothetical protein.
 
     0.862
EGM76633.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
 
     0.858
EGM76648.1
Hypothetical protein.
 
   
 0.850
EGM76647.1
PFAM: Fimbrial assembly protein (PilN).
 
   
 0.841
Your Current Organism:
Rheinheimera sp. A13L
NCBI taxonomy Id: 506534
Other names: R. sp. A13L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.