STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU81231.1Transcriptional regulator of LysR family; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
GAU86081.1
Transcriptional regulator of LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.634
GAU81232.1
Methylmalonate-semialdehyde dehydrogenase.
       0.591
GAU80208.1
LysR family aromatic hydrocarbon utilization transcriptional regulator CatR; Belongs to the LysR transcriptional regulatory family.
  
     0.588
GAU85848.1
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.543
GAU86630.1
LysR family transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.539
GAU81233.1
Branched-chain acyl-CoA dehydrogenase.
       0.529
GAU85746.1
Glycine cleavage system transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
  
     0.529
GAU86350.1
Transcriptional regulator of LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.522
GAU86359.1
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.510
GAU82514.1
LysR family transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.502
Your Current Organism:
Bosea sp. BIWAKO01
NCBI taxonomy Id: 506668
Other names: B. sp. BIWAKO-01, Bosea sp. BIWAKO-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.