Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU81007.1 | GAU82119.1 | BIWAKO_00898 | BIWAKO_02023 | Hypothetical protein; Zinc metalloprotease superfamily YpfJ protein. | HPr kinase/phosphorylase. | 0.633 |
GAU81451.1 | GAU82119.1 | BIWAKO_01345 | BIWAKO_02023 | Glucosamine-6-phosphate deaminase. | HPr kinase/phosphorylase. | 0.680 |
GAU81451.1 | GAU82120.1 | BIWAKO_01345 | BIWAKO_02024 | Glucosamine-6-phosphate deaminase. | PTS system permease IIAMan nitrogen regulatory IIA protein. | 0.757 |
GAU81451.1 | GAU82121.1 | BIWAKO_01345 | BIWAKO_02025 | Glucosamine-6-phosphate deaminase. | Phosphocarrier protein; Nitrogen regulation associated. | 0.497 |
GAU82118.1 | GAU82119.1 | BIWAKO_02022 | BIWAKO_02023 | Sensor histidine kinase ChvG. | HPr kinase/phosphorylase. | 0.852 |
GAU82118.1 | GAU82120.1 | BIWAKO_02022 | BIWAKO_02024 | Sensor histidine kinase ChvG. | PTS system permease IIAMan nitrogen regulatory IIA protein. | 0.638 |
GAU82118.1 | GAU82121.1 | BIWAKO_02022 | BIWAKO_02025 | Sensor histidine kinase ChvG. | Phosphocarrier protein; Nitrogen regulation associated. | 0.582 |
GAU82119.1 | GAU81007.1 | BIWAKO_02023 | BIWAKO_00898 | HPr kinase/phosphorylase. | Hypothetical protein; Zinc metalloprotease superfamily YpfJ protein. | 0.633 |
GAU82119.1 | GAU81451.1 | BIWAKO_02023 | BIWAKO_01345 | HPr kinase/phosphorylase. | Glucosamine-6-phosphate deaminase. | 0.680 |
GAU82119.1 | GAU82118.1 | BIWAKO_02023 | BIWAKO_02022 | HPr kinase/phosphorylase. | Sensor histidine kinase ChvG. | 0.852 |
GAU82119.1 | GAU82120.1 | BIWAKO_02023 | BIWAKO_02024 | HPr kinase/phosphorylase. | PTS system permease IIAMan nitrogen regulatory IIA protein. | 0.750 |
GAU82119.1 | GAU82121.1 | BIWAKO_02023 | BIWAKO_02025 | HPr kinase/phosphorylase. | Phosphocarrier protein; Nitrogen regulation associated. | 0.724 |
GAU82119.1 | GAU83590.1 | BIWAKO_02023 | BIWAKO_03517 | HPr kinase/phosphorylase. | HTH-type transcriptional regulator PetP. | 0.637 |
GAU82119.1 | GAU85301.1 | BIWAKO_02023 | BIWAKO_05246 | HPr kinase/phosphorylase. | Glucosamine-6-phosphate deaminase. | 0.680 |
GAU82119.1 | GAU86183.1 | BIWAKO_02023 | BIWAKO_06131 | HPr kinase/phosphorylase. | Thioredoxin. | 0.749 |
GAU82119.1 | lgt | BIWAKO_02023 | BIWAKO_03525 | HPr kinase/phosphorylase. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.693 |
GAU82119.1 | pgl | BIWAKO_02023 | BIWAKO_01016 | HPr kinase/phosphorylase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.680 |
GAU82120.1 | GAU81451.1 | BIWAKO_02024 | BIWAKO_01345 | PTS system permease IIAMan nitrogen regulatory IIA protein. | Glucosamine-6-phosphate deaminase. | 0.757 |
GAU82120.1 | GAU82118.1 | BIWAKO_02024 | BIWAKO_02022 | PTS system permease IIAMan nitrogen regulatory IIA protein. | Sensor histidine kinase ChvG. | 0.638 |
GAU82120.1 | GAU82119.1 | BIWAKO_02024 | BIWAKO_02023 | PTS system permease IIAMan nitrogen regulatory IIA protein. | HPr kinase/phosphorylase. | 0.750 |
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