Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU82447.1 | GAU82448.1 | BIWAKO_02365 | BIWAKO_02366 | Hypothetical protein. | Cytosine deaminase. | 0.558 |
GAU82447.1 | GAU82449.1 | BIWAKO_02365 | BIWAKO_02367 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.558 |
GAU82447.1 | GAU82450.1 | BIWAKO_02365 | BIWAKO_02368 | Hypothetical protein. | NAD(P)H oxidoreductase YRKL. | 0.558 |
GAU82447.1 | folD | BIWAKO_02365 | BIWAKO_02364 | Hypothetical protein. | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.675 |
GAU82448.1 | GAU82447.1 | BIWAKO_02366 | BIWAKO_02365 | Cytosine deaminase. | Hypothetical protein. | 0.558 |
GAU82448.1 | GAU82449.1 | BIWAKO_02366 | BIWAKO_02367 | Cytosine deaminase. | FAD/FMN-containing dehydrogenase. | 0.954 |
GAU82448.1 | GAU82450.1 | BIWAKO_02366 | BIWAKO_02368 | Cytosine deaminase. | NAD(P)H oxidoreductase YRKL. | 0.933 |
GAU82448.1 | folD | BIWAKO_02366 | BIWAKO_02364 | Cytosine deaminase. | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.548 |
GAU82449.1 | GAU82447.1 | BIWAKO_02367 | BIWAKO_02365 | FAD/FMN-containing dehydrogenase. | Hypothetical protein. | 0.558 |
GAU82449.1 | GAU82448.1 | BIWAKO_02367 | BIWAKO_02366 | FAD/FMN-containing dehydrogenase. | Cytosine deaminase. | 0.954 |
GAU82449.1 | GAU82450.1 | BIWAKO_02367 | BIWAKO_02368 | FAD/FMN-containing dehydrogenase. | NAD(P)H oxidoreductase YRKL. | 0.944 |
GAU82449.1 | folD | BIWAKO_02367 | BIWAKO_02364 | FAD/FMN-containing dehydrogenase. | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.541 |
GAU82450.1 | GAU82447.1 | BIWAKO_02368 | BIWAKO_02365 | NAD(P)H oxidoreductase YRKL. | Hypothetical protein. | 0.558 |
GAU82450.1 | GAU82448.1 | BIWAKO_02368 | BIWAKO_02366 | NAD(P)H oxidoreductase YRKL. | Cytosine deaminase. | 0.933 |
GAU82450.1 | GAU82449.1 | BIWAKO_02368 | BIWAKO_02367 | NAD(P)H oxidoreductase YRKL. | FAD/FMN-containing dehydrogenase. | 0.944 |
GAU82450.1 | folD | BIWAKO_02368 | BIWAKO_02364 | NAD(P)H oxidoreductase YRKL. | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.541 |
folD | GAU82447.1 | BIWAKO_02364 | BIWAKO_02365 | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Hypothetical protein. | 0.675 |
folD | GAU82448.1 | BIWAKO_02364 | BIWAKO_02366 | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Cytosine deaminase. | 0.548 |
folD | GAU82449.1 | BIWAKO_02364 | BIWAKO_02367 | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | FAD/FMN-containing dehydrogenase. | 0.541 |
folD | GAU82450.1 | BIWAKO_02364 | BIWAKO_02368 | NADP+-dependent methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | NAD(P)H oxidoreductase YRKL. | 0.541 |