Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU81168.1 | GAU81421.1 | BIWAKO_01059 | BIWAKO_01315 | Acetylpolyamine aminohydrolase. | Ankyrin. | 0.829 |
GAU81168.1 | GAU81608.1 | BIWAKO_01059 | BIWAKO_01509 | Acetylpolyamine aminohydrolase. | Ankyrin. | 0.829 |
GAU81168.1 | GAU82826.1 | BIWAKO_01059 | BIWAKO_02748 | Acetylpolyamine aminohydrolase. | Hypothetical protein. | 0.971 |
GAU81168.1 | rplF | BIWAKO_01059 | BIWAKO_04194 | Acetylpolyamine aminohydrolase. | LSU ribosomal protein L6p; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.863 |
GAU81264.1 | GAU81421.1 | BIWAKO_01156 | BIWAKO_01315 | mRNA 3-end processing factor. | Ankyrin. | 0.599 |
GAU81264.1 | GAU81608.1 | BIWAKO_01156 | BIWAKO_01509 | mRNA 3-end processing factor. | Ankyrin. | 0.599 |
GAU81264.1 | GAU82826.1 | BIWAKO_01156 | BIWAKO_02748 | mRNA 3-end processing factor. | Hypothetical protein. | 0.997 |
GAU81264.1 | gpmI | BIWAKO_01156 | BIWAKO_03254 | mRNA 3-end processing factor. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.991 |
GAU81421.1 | GAU81168.1 | BIWAKO_01315 | BIWAKO_01059 | Ankyrin. | Acetylpolyamine aminohydrolase. | 0.829 |
GAU81421.1 | GAU81264.1 | BIWAKO_01315 | BIWAKO_01156 | Ankyrin. | mRNA 3-end processing factor. | 0.599 |
GAU81421.1 | GAU82826.1 | BIWAKO_01315 | BIWAKO_02748 | Ankyrin. | Hypothetical protein. | 0.979 |
GAU81421.1 | GAU83136.1 | BIWAKO_01315 | BIWAKO_03060 | Ankyrin. | Glucose-methanol-choline GMC oxidoreductase; NAD binding site. | 0.970 |
GAU81421.1 | GAU83369.1 | BIWAKO_01315 | BIWAKO_03293 | Ankyrin. | Acetylspermidine deacetylase. | 0.829 |
GAU81421.1 | GAU85268.1 | BIWAKO_01315 | BIWAKO_05213 | Ankyrin. | Choline dehydrogenase. | 0.970 |
GAU81421.1 | alaS | BIWAKO_01315 | BIWAKO_03919 | Ankyrin. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.821 |
GAU81608.1 | GAU81168.1 | BIWAKO_01509 | BIWAKO_01059 | Ankyrin. | Acetylpolyamine aminohydrolase. | 0.829 |
GAU81608.1 | GAU81264.1 | BIWAKO_01509 | BIWAKO_01156 | Ankyrin. | mRNA 3-end processing factor. | 0.599 |
GAU81608.1 | GAU82826.1 | BIWAKO_01509 | BIWAKO_02748 | Ankyrin. | Hypothetical protein. | 0.979 |
GAU81608.1 | GAU83136.1 | BIWAKO_01509 | BIWAKO_03060 | Ankyrin. | Glucose-methanol-choline GMC oxidoreductase; NAD binding site. | 0.970 |
GAU81608.1 | GAU83369.1 | BIWAKO_01509 | BIWAKO_03293 | Ankyrin. | Acetylspermidine deacetylase. | 0.829 |
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