STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpE-2Glycerol-3-phosphate ABC transporter permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (296 aa)    
Predicted Functional Partners:
GAU86585.1
Glycerol-3-phosphate ABC transporter permease protein UgpA.
 
 0.981
GAU86586.1
Glycerol-3-phosphate ABC transporter periplasmic glycerol-3-phosphate-binding protein.
 
 0.980
GAU81645.1
Glycerol-3-phosphate ABC transporter permease protein UgpA.
 
 0.924
GAU81644.1
Glycerol-3-phosphate ABC transporter periplasmic glycerol-3-phosphate-binding protein.
 
 0.922
GAU81460.1
N-acetyl-D-glucosamine ABC transport system permease protein 1.
 
 0.918
GAU86601.1
Multiple sugar ABC transporter membrane-spanning permease protein MsmF.
 
 0.918
GAU80175.1
N-acetyl-D-glucosamine ABC transport system permease protein 1.
 
 0.910
GAU84489.1
N-acetyl-D-glucosamine ABC transport system permease protein 1.
 
 0.910
GAU82699.1
Maltose/maltodextrin ABC transporter permease protein MalF.
 
 0.909
GAU87025.1
Inositol transport system permease protein.
 
 0.909
Your Current Organism:
Bosea sp. BIWAKO01
NCBI taxonomy Id: 506668
Other names: B. sp. BIWAKO-01, Bosea sp. BIWAKO-01
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