STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIN12335.1Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology. (1230 aa)    
Predicted Functional Partners:
KIN12334.1
Conjugal transfer protein TraU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
KIN12333.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
KIN12341.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
KIN12332.1
Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
KIN12331.1
Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
     0.880
KIN11649.1
Conjugal transfer protein TraL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.791
KIN11120.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.791
KIN11638.1
Conjugal transfer protein TraU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
KIN11646.1
Conjugal transfer protein TraA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
KIN11730.1
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
Your Current Organism:
Vibrio mytili
NCBI taxonomy Id: 50718
Other names: ATCC 51288, CAIM 528, CCUG 38424, CECT 632, CIP 103929, LMG 19157, LMG:19157, V. mytili, strain 165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.