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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43390.1HlyB/MsbA family ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components. (544 aa)    
Predicted Functional Partners:
EDM43391.1
COG0845 Membrane-fusion protein.
 0.994
EDM43392.1
COG1538 Outer membrane protein.
 
 
 0.956
EDM43389.1
Hypothetical protein; COG1309 Transcriptional regulator.
 
     0.950
EDM45664.1
Membrane fusion efflux protein, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.913
EDM45192.1
ABC transporter, ATP-binding/membrane-spanning protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.864
EDM43186.1
ABC transporter, ATP-binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.829
EDM43919.1
ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.822
EDM43211.1
ABC transporter, ATP-binding protein, MsbA family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.821
EDM44769.1
ABC transporter, ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 
0.821
EDM44672.1
COG5343 Uncharacterized protein conserved in bacteria.
  
     0.503
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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