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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43399.1ARA1; COG0656 Aldo/keto reductases, related to diketogulonate reductase. (280 aa)    
Predicted Functional Partners:
EDM45627.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.812
EDM45741.1
Methionine synthase I, homocysteine S-methyltransferase; COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
   
 0.769
EDM43398.1
Hypothetical protein.
       0.732
EDM45567.1
Putative Oxidoreductase, FAD-binding protein; COG3182 Uncharacterized iron-regulated membrane protein.
    
 0.715
EDM44504.1
COG1454 Alcohol dehydrogenase, class IV.
   
 0.668
EDM43397.1
COG0477 Permeases of the major facilitator superfamily.
    
 0.653
EDM43400.1
Hypothetical protein.
       0.651
EDM43253.1
Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
 0.638
EDM44487.1
Iron-containing alcohol dehydrogenase; COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family.
  
 
 0.629
EDM43489.1
Acetyl esterase, putative; COG0657 Esterase/lipase.
  
 
 0.603
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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