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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43426.1Oligopeptide ABC transporter, solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (533 aa)    
Predicted Functional Partners:
EDM45186.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.979
EDM45037.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.976
EDM45421.1
ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.942
EDM43427.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
       0.773
EDM45286.1
Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
   
 
 0.668
EDM44387.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
 
  
  0.626
EDM43979.1
COG1131 ABC-type multidrug transport system, ATPase component.
    
 0.602
EDM44723.1
Probable ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
 0.602
EDM43428.1
Hypothetical protein.
       0.601
EDM43425.1
COG0621 2-methylthioadenine synthetase.
       0.545
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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