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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43435.1Hypothetical protein; COG1117 ABC-type phosphate transport system, ATPase component. (604 aa)    
Predicted Functional Partners:
EDM44163.1
Hypothetical protein.
  
     0.722
EDM44152.1
Hypothetical protein.
  
  
  0.672
EDM45228.1
Hypothetical protein.
  
 
   0.534
EDM44718.1
Hypothetical protein.
  
     0.528
EDM44725.1
Hypothetical protein.
  
     0.511
EDM43941.1
Glycosyl hydrolase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
  
  
  0.484
EDM43416.1
COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.475
EDM44744.1
Hypothetical protein.
  
 
   0.471
EDM44198.1
Hypothetical protein; COG1510 Predicted transcriptional regulators; Belongs to the GbsR family.
  
     0.469
EDM43436.1
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.447
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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