STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43450.1Cytochrome c assembly protein; COG1609 Transcriptional regulators. (1034 aa)    
Predicted Functional Partners:
EDM43376.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
    
 0.689
EDM45457.1
Zinc ABC transporter, ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
  
 
  0.689
EDM44661.1
ABC transporter ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
    
 0.689
EDM45458.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
  0.675
EDM45459.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 
  0.675
EDM45421.1
ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
     
  0.662
EDM43412.1
iron(III) ABC transporter, ATP-binding protein, putative; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
     
  0.612
EDM43484.1
LysM-repeat protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
  0.601
EDM43912.1
Hypothetical protein; COG0795 Predicted permeases.
    
  0.595
EDM42934.1
Hypothetical protein; COG0795 Predicted permeases.
    
  0.595
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.