Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM43468.1COG2234 Predicted aminopeptidases. (338 aa)    
Predicted Functional Partners:
EDM45050.1
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
    0.643
EDM45239.1
COG0308 Aminopeptidase N.
  
 
  0.562
EDM43467.1
Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
   
   0.559
rnr
Exoribonuclease II; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
   
  0.457
EDM45312.1
Zn-dependent aminopeptidase, putative; COG0308 Aminopeptidase N.
  
 
  0.447
EDM45048.1
Di-tripeptide ABC transporter-like protein; COG3104 Dipeptide/tripeptide permease.
  
 
   0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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