STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43470.1Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (184 aa)    
Predicted Functional Partners:
pgk
COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
      0.857
EDM43469.1
methionine--tRNA ligase (methionine tRNA synthetase); COG0073 EMAP domain.
       0.554
EDM43471.1
Hypothetical protein.
       0.548
EDM44033.1
Oligopeptidase (protease II); COG1770 Protease II.
 
      0.456
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.