Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM43477.1COG2849 Uncharacterized protein conserved in bacteria. (229 aa)    
Predicted Functional Partners:
EDM43475.1
Putative exported serine protease, subtilase family protein; COG1404 Subtilisin-like serine proteases.
 
     0.815
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.793
EDM45272.1
TPR-repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.668
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
     0.571
EDM45372.1
Possible capK protein; COG1541 Coenzyme F390 synthetase.
  
     0.550
EDM43474.1
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.537
EDM45012.1
COG2149 Predicted membrane protein.
  
     0.432
EDM45268.1
Hypothetical protein.
  
     0.429
EDM45235.1
2-amino-3-carboxylmuconate-6-semialdehyde decarboxylase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
  
     0.414
EDM44151.1
Hypothetical protein.
  
     0.411
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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