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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bshCCOG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family. (535 aa)    
Predicted Functional Partners:
EDM44021.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
  
 0.909
EDM43455.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
  
 0.796
EDM43087.1
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase.
  
  
  0.776
EDM45453.1
Hypothetical protein; Belongs to the UPF0403 family.
  
   
 0.773
EDM45511.1
Hypothetical protein.
  
     0.695
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
       0.617
EDM44218.1
COG3091 Uncharacterized protein conserved in bacteria.
  
     0.600
EDM43751.1
Hypothetical protein.
  
     0.585
EDM43504.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.558
EDM43487.1
B-glycosyltransferase, glycosyltransferase family 2 protein; COG1216 Predicted glycosyltransferases.
       0.545
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.