STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43490.1COG0009 Putative translation factor (SUA5); Belongs to the SUA5 family. (205 aa)    
Predicted Functional Partners:
EDM45663.1
Putative glycoprotease family exported protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
 
  
 0.831
tsaD
Putative glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.804
EDM44569.1
Putative ATPase/GTPase; COG0802 Predicted ATPase or kinase.
    
 0.785
EDM43491.1
COG0210 Superfamily I DNA and RNA helicases.
       0.555
EDM45154.1
COG0637 Predicted phosphatase/phosphohexomutase.
    
  0.526
EDM45280.1
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
  0.523
EDM43105.1
Hypothetical protein; COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins.
  
    0.468
EDM43293.1
Acetyltransferase, GNAT family protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
    
  0.429
EDM44036.1
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
    
  0.429
EDM43270.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
    0.405
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.