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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43510.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.843
EDM43659.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.766
EDM45298.1
Hypothetical protein.
  
     0.760
EDM44761.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
  
     0.760
EDM43518.1
Hypothetical protein.
  
     0.755
EDM44706.1
Hypothetical protein.
  
     0.753
EDM44721.1
Hypothetical protein.
  
     0.740
EDM45033.1
Hypothetical protein.
  
     0.727
EDM44770.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.724
EDM43766.1
Cell division protein FtsQ.
  
     0.721
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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