Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43518.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
EDM43510.1
Hypothetical protein.
  
     0.755
EDM45298.1
Hypothetical protein.
  
     0.732
EDM44721.1
Hypothetical protein.
  
     0.724
EDM43517.1
4-amino-4-deoxychorismate lyase, putative; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
 
     0.720
EDM42935.1
Gliding motility-related protein; possible outer membrane protein.
 
     0.686
EDM44974.1
Hypothetical protein.
  
     0.672
EDM44374.1
Hypothetical protein.
  
     0.660
EDM43131.1
Hypothetical protein; COG2971 Predicted N-acetylglucosamine kinase.
  
     0.632
EDM43030.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.619
EDM45187.1
Hypothetical protein.
  
     0.607
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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