STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43530.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
EDM43045.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.775
EDM43531.1
Hypothetical protein.
       0.768
EDM44394.1
Hypothetical protein; COG4257 Streptogramin lyase.
  
     0.740
EDM43067.1
Hypothetical protein.
  
     0.720
EDM44224.1
COG1843 Flagellar hook capping protein.
  
     0.706
EDM42949.1
Hypothetical protein; COG2067 Long-chain fatty acid transport protein.
  
     0.698
EDM44324.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.697
EDM43811.1
Outer membrane protein; COG0419 ATPase involved in DNA repair.
  
     0.609
EDM43243.1
CHU large protein; uncharacterized.
  
     0.604
EDM43384.1
B-glycosyltransferase-related protein, glycosyltransferase family 2 protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.570
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.