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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43265.1COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (333 aa)    
Predicted Functional Partners:
coaE
Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.961
EDM43264.1
Hypothetical protein.
       0.785
EDM43262.1
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
 
     0.647
EDM43261.1
Two-component system, transcriptional regulatory protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.633
EDM42967.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.580
EDM43266.1
COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH).
       0.565
EDM42964.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.560
EDM43383.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.559
EDM42976.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.543
EDM45371.1
TuaG; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
  0.508
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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