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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43301.1Putative S1/P1 Nuclease; COG0178 Excinuclease ATPase subunit. (257 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
  0.627
EDM43302.1
COG1073 Hydrolases of the alpha/beta superfamily.
       0.529
EDM43197.1
Hypothetical protein.
  
     0.463
rpmE2
50S ribosomal protein L31 type B; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.421
EDM43303.1
Hypothetical protein; COG5505 Predicted integral membrane protein.
       0.420
EDM44655.1
Peptidase M28; COG2234 Predicted aminopeptidases.
  
     0.403
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.