STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43304.1Hypothetical protein; COG1812 Archaeal S-adenosylmethionine synthetase. (235 aa)    
Predicted Functional Partners:
EDM45611.1
Hypothetical protein.
  
     0.773
EDM45603.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.772
EDM43195.1
Hypothetical protein.
  
     0.771
EDM43116.1
Hypothetical protein.
  
     0.770
EDM44081.1
Ribonuclease Z.
  
     0.762
EDM44436.1
Hypothetical protein.
  
     0.760
EDM43076.1
Hypothetical protein.
  
     0.757
EDM43970.1
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
     0.749
EDM43287.1
Hypothetical protein.
  
     0.748
EDM45673.1
Hypothetical protein.
  
     0.747
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.