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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43314.1Hypothetical protein. (1164 aa)    
Predicted Functional Partners:
EDM43313.1
Hypothetical protein.
   
   0.807
EDM43311.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
  
  0.673
EDM43315.1
CheA Signal Transduction Histidine Kinases (STHK); COG3210 Large exoproteins involved in heme utilization or adhesion.
   
  0.544
EDM43312.1
Hypothetical protein.
       0.498
EDM43347.1
Peptidase S41; COG0793 Periplasmic protease.
   
  0.443
EDM43349.1
Hypothetical protein; COG0556 Helicase subunit of the DNA excision repair complex.
   
  0.443
EDM43352.1
Beta-lactamase; COG0457 FOG: TPR repeat.
   
  0.443
EDM45039.1
Periplasmic tail-specific proteinase; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
   
  0.443
EDM45317.1
C-terminal processing peptidase, tail-specific protease; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
   
  0.443
EDM45571.1
Carboxy-terminal processing protease precursor; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
   
  0.443
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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