rpsU protein (unidentified eubacterium SCB49)

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Score

rpsU

COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (64 aa)

Predicted Functional Partners:

rpmH

0.999

rplK

0.999

rpsT-2

0.999

rplM

0.999

rpsI

0.999

rpsB

0.999

rpmF

0.999

rplY

0.999

rplU

0.999

rpmA

0.999

Your Current Organism:

unidentified eubacterium SCB49

NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplK	rplM	SCB49_01167	SCB49_04700	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplK	rplU	SCB49_01167	SCB49_07602	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplK	rplY	SCB49_01167	SCB49_07117	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.999
rplK	rpmA	SCB49_01167	SCB49_07607	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplK	rpmF	SCB49_01167	SCB49_05807	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplK	rpmH	SCB49_01167	SCB49_00175	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Thiol-disulfide oxidoreductase; Belongs to the bacterial ribosomal protein bL34 family.	0.999
rplK	rpsB	SCB49_01167	SCB49_04710	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplK	rpsI	SCB49_01167	SCB49_04705	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplK	rpsT-2	SCB49_01167	SCB49_01787	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999
rplK	rpsU	SCB49_01167	SCB49_01192	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.999
rplM	rplK	SCB49_04700	SCB49_01167	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplM	rplU	SCB49_04700	SCB49_07602	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplM	rplY	SCB49_04700	SCB49_07117	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.999
rplM	rpmA	SCB49_04700	SCB49_07607	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplM	rpmF	SCB49_04700	SCB49_05807	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplM	rpmH	SCB49_04700	SCB49_00175	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Thiol-disulfide oxidoreductase; Belongs to the bacterial ribosomal protein bL34 family.	0.999
rplM	rpsB	SCB49_04700	SCB49_04710	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplM	rpsI	SCB49_04700	SCB49_04705	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsT-2	SCB49_04700	SCB49_01787	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999
rplM	rpsU	SCB49_04700	SCB49_01192	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.999