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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43330.1COG1960 Acyl-CoA dehydrogenases. (387 aa)    
Predicted Functional Partners:
EDM43563.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.995
EDM44647.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.987
EDM43564.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 0.975
EDM43597.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 0.871
EDM45447.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.859
EDM43591.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
  0.830
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.777
EDM42911.1
Ferredoxin 2 with 4Fe-4S binding domain; COG1145 Ferredoxin.
  
 0.744
EDM43599.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.742
EDM44743.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 
 0.731
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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