STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43335.1Hypothetical protein. (440 aa)    
Predicted Functional Partners:
EDM43331.1
comEA protein-related protein; COG1555 DNA uptake protein and related DNA-binding proteins.
 
     0.678
EDM43333.1
Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.653
EDM43334.1
Hypothetical protein.
       0.653
EDM45248.1
Smf protein DNA processing chain A; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
     0.590
EDM43336.1
COG2884 Predicted ATPase involved in cell division.
       0.584
EDM43079.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
     0.534
EDM43337.1
Hypothetical protein.
       0.464
EDM43952.1
Hypothetical protein.
  
     0.455
EDM43332.1
Putative Na(+)-linked D-alanine glycine permease; COG1115 Na+/alanine symporter.
       0.427
EDM45575.1
Hypothetical protein.
  
     0.405
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.