STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43336.1COG2884 Predicted ATPase involved in cell division. (227 aa)    
Predicted Functional Partners:
EDM43653.1
COG2177 Cell division protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.998
EDM44141.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.900
EDM43465.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.899
EDM45029.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.899
EDM45667.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.888
EDM45274.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
 
 
 
 0.878
EDM45668.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
      0.873
ftsZ
Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.836
ftsA
Cell division protein A; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
    
 0.773
EDM43766.1
Cell division protein FtsQ.
     
 0.770
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.