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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43370.1Beta-carotene hydroxylase. (149 aa)    
Predicted Functional Partners:
EDM43369.1
COG1562 Phytoene/squalene synthetase.
 
 0.991
EDM43368.1
COG1233 Phytoene dehydrogenase and related proteins.
 
   
 0.956
EDM43367.1
Probable transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators.
 
     0.850
EDM43072.1
Hypothetical protein.
   
 0.738
EDM43792.1
COG3239 Fatty acid desaturase.
  
 
 0.709
kmo
Putative kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 0.705
EDM44626.1
Monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
 0.705
EDM43371.1
Hypothetical protein.
 
     0.692
EDM44269.1
COG2124 Cytochrome P450.
   
 0.681
EDM44453.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
   
 0.663
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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