STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43378.1Hypothetical protein; COG0438 Glycosyltransferase. (381 aa)    
Predicted Functional Partners:
EDM43382.1
Hypothetical protein; COG0662 Mannose-6-phosphate isomerase.
 
 
  0.780
EDM42945.1
Hypothetical protein.
  
     0.755
EDM43329.1
Hypothetical protein.
  
     0.728
EDM42947.1
Enterobacterial common antigen (ECA) biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.687
EDM44763.1
Hypothetical protein.
  
     0.679
EDM44819.1
Hypothetical protein; COG3291 FOG: PKD repeat.
  
     0.668
EDM43379.1
Wlac protein; COG0438 Glycosyltransferase.
 
     0.650
EDM43573.1
Hypothetical protein.
  
     0.647
EDM44324.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.646
EDM44185.1
COG0457 FOG: TPR repeat.
  
     0.639
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.