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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43379.1Wlac protein; COG0438 Glycosyltransferase. (365 aa)    
Predicted Functional Partners:
EDM42989.1
Probable galactosyl transferase; COG0438 Glycosyltransferase.
  
     0.747
EDM43378.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
     0.651
EDM42995.1
Putative lipopolysaccharide biosynthesis protein; COG0438 Glycosyltransferase.
  
     0.629
EDM43380.1
Hypothetical protein.
       0.590
EDM43381.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
       0.590
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.526
EDM43382.1
Hypothetical protein; COG0662 Mannose-6-phosphate isomerase.
 
    0.490
EDM42952.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
  
     0.451
EDM42981.1
NAD-dependent epimerase/dehydratase family protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
  0.439
EDM42983.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.437
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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