STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EDM42941.1Putative transmembrane permease; COG4591 ABC-type transport system, involved in lipoprotein release, permease component. (411 aa)    
Predicted Functional Partners:
lolD
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  0.932
EDM45305.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
  
 
0.851
EDM45669.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
  0.788
macB
ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   
  0.788
EDM44140.1
Putative ABC transporter ATP-binding component; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
  0.788
EDM44495.1
ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
  0.788
EDM42935.1
Gliding motility-related protein; possible outer membrane protein.
 
 
 
 0.751
EDM45224.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.691
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
     0.688
EDM42942.1
COG3876 Uncharacterized protein conserved in bacteria.
       0.642
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.