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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42948.1CDP-diacylglycerol-serine-O- phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (245 aa)    
Predicted Functional Partners:
EDM45209.1
COG0688 Phosphatidylserine decarboxylase.
 
 
 0.940
EDM45208.1
Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); COG0575 CDP-diglyceride synthetase.
    
  0.625
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
  0.605
EDM44773.1
GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase); In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.575
EDM43332.1
Putative Na(+)-linked D-alanine glycine permease; COG1115 Na+/alanine symporter.
    
  0.573
EDM43145.1
COG1115 Na+/alanine symporter.
    
  0.573
EDM42949.1
Hypothetical protein; COG2067 Long-chain fatty acid transport protein.
       0.558
EDM45481.1
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
 
  0.521
EDM45591.1
COG0038 Chloride channel protein EriC.
    
  0.500
EDM45166.1
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
   
 
  0.455
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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