STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM42951.1COG0395 ABC-type sugar transport system, permease component. (436 aa)    
Predicted Functional Partners:
EDM42983.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.982
EDM43003.1
Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.966
EDM42952.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
 
  0.844
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.760
EDM43001.1
Putative capsular polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
 0.693
EDM42956.1
Capsular polysaccharide biosynthesis protein; COG0438 Glycosyltransferase.
 
 
  0.688
EDM42957.1
Glycosyl transferase, group 1 family protein; COG0438 Glycosyltransferase.
 
 
  0.675
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.653
EDM43002.1
Polysaccharide export protein, BexD/CtrA/VexA family; COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.644
EDM42955.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
 
 0.602
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.