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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42966.1Hypothetical protein; COG0438 Glycosyltransferase. (395 aa)    
Predicted Functional Partners:
EDM42962.1
COG0438 Glycosyltransferase.
 
     0.919
EDM42956.1
Capsular polysaccharide biosynthesis protein; COG0438 Glycosyltransferase.
 
     0.832
EDM42957.1
Glycosyl transferase, group 1 family protein; COG0438 Glycosyltransferase.
 
     0.828
EDM42967.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.807
EDM42968.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.807
EDM42958.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.791
EDM42964.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.767
EDM42963.1
Hypothetical protein; COG3510 Cephalosporin hydroxylase.
       0.664
EDM42965.1
Hypothetical protein.
       0.664
EDM42960.1
COG0438 Glycosyltransferase.
 
    
0.658
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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