Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM42972.1COG0110 Acetyltransferase (isoleucine patch superfamily). (197 aa)    
Predicted Functional Partners:
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.820
EDM42971.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.799
EDM42973.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.799
EDM42970.1
Amylovoran biosynthesis glycosyl transferase AmsK; COG0438 Glycosyltransferase.
  
 
  0.771
EDM42976.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.763
EDM42999.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.747
EDM42974.1
COG1216 Predicted glycosyltransferases.
       0.732
EDM42977.1
Hypothetical protein; COG3562 Capsule polysaccharide export protein.
       0.595
EDM42940.1
Cystathionine beta-synthase; COG0031 Cysteine synthase.
    
  0.587
EDM44034.1
Cystathionine beta-synthase; COG0031 Cysteine synthase.
    
  0.587
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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