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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42973.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (316 aa)    
Predicted Functional Partners:
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 
0.842
EDM42971.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    
0.839
EDM42976.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    
0.811
EDM42970.1
Amylovoran biosynthesis glycosyl transferase AmsK; COG0438 Glycosyltransferase.
  
 
  0.780
EDM42972.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
  
    0.777
EDM42964.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.775
EDM42974.1
COG1216 Predicted glycosyltransferases.
    
  0.733
EDM45362.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.632
EDM42977.1
Hypothetical protein; COG3562 Capsule polysaccharide export protein.
  
  
 0.596
EDM45217.1
Putative transmembrane glycosyltransferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
  
  0.533
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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