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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42974.1COG1216 Predicted glycosyltransferases. (308 aa)    
Predicted Functional Partners:
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.831
EDM42976.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
  0.774
EDM42970.1
Amylovoran biosynthesis glycosyl transferase AmsK; COG0438 Glycosyltransferase.
 
    0.772
EDM42972.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
       0.734
EDM42971.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
  0.733
EDM42973.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
  0.733
EDM42980.1
ABC transporter permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.730
EDM42979.1
Polysialic acid transport ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.692
EDM45357.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.644
EDM42977.1
Hypothetical protein; COG3562 Capsule polysaccharide export protein.
       0.609
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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