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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42979.1Polysialic acid transport ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (399 aa)    
Predicted Functional Partners:
EDM42980.1
ABC transporter permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.999
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.934
EDM43002.1
Polysaccharide export protein, BexD/CtrA/VexA family; COG1596 Periplasmic protein involved in polysaccharide export.
  
 
 0.860
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.799
EDM42978.1
Sulfotransferase; COG0457 FOG: TPR repeat.
       0.780
EDM42977.1
Hypothetical protein; COG3562 Capsule polysaccharide export protein.
     
 0.761
EDM42974.1
COG1216 Predicted glycosyltransferases.
 
  
 0.692
EDM42982.1
UDP-glucose/GDP-mannose dehydrogenase family protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.656
EDM44330.1
Putative amidophosphoribosyl-transferase; COG1040 Predicted amidophosphoribosyltransferases.
   
    0.636
EDM42981.1
NAD-dependent epimerase/dehydratase family protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  
 0.623
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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