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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42983.1Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (829 aa)    
Predicted Functional Partners:
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
 0.999
EDM43002.1
Polysaccharide export protein, BexD/CtrA/VexA family; COG1596 Periplasmic protein involved in polysaccharide export.
 0.999
EDM42951.1
COG0395 ABC-type sugar transport system, permease component.
 
 
 0.975
EDM42998.1
Putative undecaprenyl-phosphate glycosyl-1-phosphate transferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.955
EDM45370.1
Glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.951
EDM43001.1
Putative capsular polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.923
EDM45372.1
Possible capK protein; COG1541 Coenzyme F390 synthetase.
 
  
  0.885
EDM42982.1
UDP-glucose/GDP-mannose dehydrogenase family protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.872
EDM43003.1
Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
0.843
EDM42952.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
  
 0.783
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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