rpsT-2 protein (unidentified eubacterium SCB49)

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Score

rpsT-2

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (83 aa)

Predicted Functional Partners:

rpsU

0.996

rpsI

0.995

rpsO-2

0.995

rpsP

0.994

rpsJ

0.994

rpsR

0.994

rpsF

0.993

rplM

0.992

rpsB

0.992

rpmF

0.992

Your Current Organism:

unidentified eubacterium SCB49

NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rpmF	SCB49_04700	SCB49_05807	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpsB	SCB49_04700	SCB49_04710	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rplM	rpsF	SCB49_04700	SCB49_12044	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
rplM	rpsI	SCB49_04700	SCB49_04705	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsJ	SCB49_04700	SCB49_09495	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.993
rplM	rpsO-2	SCB49_04700	SCB49_09305	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplM	rpsP	SCB49_04700	SCB49_08838	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplM	rpsR	SCB49_04700	SCB49_12049	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.993
rplM	rpsT-2	SCB49_04700	SCB49_01787	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplM	rpsU	SCB49_04700	SCB49_01192	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.983
rpmF	rplM	SCB49_05807	SCB49_04700	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rpmF	rpsB	SCB49_05807	SCB49_04710	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rpmF	rpsF	SCB49_05807	SCB49_12044	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989
rpmF	rpsI	SCB49_05807	SCB49_04705	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.982
rpmF	rpsJ	SCB49_05807	SCB49_09495	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.986
rpmF	rpsO-2	SCB49_05807	SCB49_09305	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rpmF	rpsP	SCB49_05807	SCB49_08838	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rpmF	rpsR	SCB49_05807	SCB49_12049	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.986
rpmF	rpsT-2	SCB49_05807	SCB49_01787	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rpmF	rpsU	SCB49_05807	SCB49_01192	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.983