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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42827.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
EDM42828.1
Putative hemin receptor.
 
     0.839
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.757
EDM45278.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.706
EDM44531.1
Hypothetical protein.
  
     0.685
EDM45250.1
Hypothetical protein.
  
     0.629
EDM43708.1
Hypothetical protein.
  
     0.604
EDM44570.1
Hypothetical protein.
  
     0.577
nadD
Nicotinic acid mononucleotide adenyltransferase.
  
     0.576
EDM43273.1
Hypothetical protein.
  
     0.562
EDM43524.1
Fructose-6-phosphate aldolase 2; COG1225 Peroxiredoxin.
  
     0.552
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.