close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42829.1CHU large protein; COG3188 P pilus assembly protein, porin PapC. (289 aa)    
Predicted Functional Partners:
EDM44819.1
Hypothetical protein; COG3291 FOG: PKD repeat.
 
     0.966
EDM42817.1
Hypothetical protein.
 
     0.960
EDM45658.1
Hypothetical protein; COG0018 Arginyl-tRNA synthetase.
  
     0.768
EDM43567.1
Hypothetical protein.
  
 
   0.724
EDM45507.1
CHU large protein; mannosidase-related protein.
 
     0.704
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
 
   0.699
ppnK
Inorganic polyphosphate/ATP-NAD kinase.
  
    0.693
EDM45508.1
Hypothetical protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
     0.672
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
 
  0.596
EDM44170.1
Hypothetical protein; COG0364 Glucose-6-phosphate 1-dehydrogenase.
  
     0.595
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.