STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44836.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EDM45575.1
Hypothetical protein.
  
     0.766
EDM44719.1
COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.650
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.637
EDM43270.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.629
EDM45688.1
COG2825 Outer membrane protein.
  
     0.601
EDM45495.1
Putative regulatory protein; COG1734 DnaK suppressor protein.
  
     0.593
EDM44750.1
Hypothetical protein.
  
     0.588
EDM45224.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.579
gidB
Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
     0.574
EDM44835.1
Probable cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.569
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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