STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44855.1Peptidase, M28D (aminopeptidase ES-62) subfamily protein; COG2234 Predicted aminopeptidases. (470 aa)    
Predicted Functional Partners:
EDM45239.1
COG0308 Aminopeptidase N.
  
 
  0.500
EDM44304.1
COG2819 Predicted hydrolase of the alpha/beta superfamily.
  
     0.493
rnr
Exoribonuclease II; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
   
  0.457
EDM43973.1
Neutral zinc metallopeptidase, M1 family protein; COG0308 Aminopeptidase N.
  
 
  0.418
EDM44856.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.410
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.