STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44880.1Hypothetical protein. (351 aa)    
Predicted Functional Partners:
EDM45507.1
CHU large protein; mannosidase-related protein.
  
     0.629
EDM43806.1
Hypothetical protein.
  
     0.622
EDM43646.1
COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
  
     0.537
EDM43807.1
COG4206 Outer membrane cobalamin receptor protein.
  
     0.480
EDM45055.1
Hypothetical protein.
  
     0.451
EDM43810.1
Putative outer membrane protein probably involved in nutrient binding; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.446
EDM43809.1
Putative outer membrane receptor protein.
  
     0.439
EDM45506.1
CHU large protein; uncharacterized.
  
     0.436
EDM44879.1
Hypothetical protein.
       0.434
EDM44295.1
Lipase (putative secreted protein); COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.431
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.