STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44886.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
EDM45272.1
TPR-repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.730
EDM43540.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.696
EDM44882.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.683
EDM45616.1
Hypothetical protein.
  
     0.677
EDM44885.1
Transcriptional regulator, AsnC family protein; COG1522 Transcriptional regulators.
 
     0.654
EDM44535.1
Hypothetical protein.
  
     0.650
EDM45590.1
Hypothetical protein.
  
     0.635
EDM45251.1
COG1272 Predicted membrane protein, hemolysin III homolog.
  
     0.613
EDM44392.1
COG3047 Outer membrane protein W.
  
     0.594
EDM44185.1
COG0457 FOG: TPR repeat.
  
     0.589
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.