Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM44891.1COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. (257 aa)    
Predicted Functional Partners:
EDM43412.1
iron(III) ABC transporter, ATP-binding protein, putative; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 0.933
EDM43411.1
iron(III) ABC transporter, permease protein, putative; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.904
pyrF
COG0284 Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
    0.810
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
 0.788
EDM43426.1
Oligopeptide ABC transporter, solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
    
 0.715
EDM45285.1
Multiple sugar-binding ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
     
 0.706
EDM45457.1
Zinc ABC transporter, ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
     
 0.699
EDM45458.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
     
 0.687
EDM45459.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
     
 0.687
EDM44212.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
     
  0.682
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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