STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44897.1Curli production assembly/transport component CsgF precursor. (133 aa)    
Predicted Functional Partners:
EDM44896.1
COG1462 Uncharacterized protein involved in formation of curli polymers.
 
 0.998
EDM44317.1
Hypothetical protein.
  
 0.966
EDM44895.1
tolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
 
     0.946
EDM44900.1
Curlin associated repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
 0.906
EDM44898.1
Hypothetical protein.
       0.747
EDM44899.1
Hypothetical protein.
       0.739
EDM44894.1
Putative phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
       0.547
EDM44891.1
COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.496
EDM43635.1
Hypothetical protein.
  
     0.420
EDM43636.1
Hypothetical protein.
  
     0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.